Softwares
- DEComplexDisease
- A tool to identify the patient-DEG moudels, used for precise medicine discovery
- BiReg
- A tools for discovery of partial transcriptional regulation
- transgeneR
- A R package for transgene intergration and rearragement discovery using NGS data
- TSD
- A perl package for complex rearragement discovery using long reads. It is useful for studies of virus infection, transgene intergration and cancer CNV.
- M2T
- A tool to screen the drug using the reverse-match signatures
Web tools
- Drug target discovery for complex disease and cancer
- An online tool to perform drug target discovery for complex disease. It can integrate as many disease data to find the drug targets with good potency in both molecular regulation and clinical association.
- GCN-based drug repositioning using transcriptomic features
- This is a GCN-based tool to perform drug repositioning using transcriptomic features.
- Tissue-specific drug interacting target prediction
- An online tool to predict the drug interacting targets in a tissue-specific manner. It can be used for drug MOA studies or to screen the compounds for a specific target
- HiC Visualization
- An online tool to visualize the Hi-C loops for AD and aging
Data
- Hi-C data for AD: Hi-C sequencing data for AD brain tissues.